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authorMichal Baudin <michael.baudin@scilab.org>2009-10-29 14:56:28 +0100
committerMichal Baudin <michael.baudin@scilab.org>2009-10-29 14:56:28 +0100
commit87d4797569d949502b34a6f82a20f0cae1a163c1 (patch)
treee2cd0acc1acc08a22c38de28ed6a3f49bfccd1f6 /scilab_doc
parentf164f462e4bfb845bccc7463df07cd401177dc1f (diff)
downloadscilab-87d4797569d949502b34a6f82a20f0cae1a163c1.zip
scilab-87d4797569d949502b34a6f82a20f0cae1a163c1.tar.gz
fminsearch: Organized User Manual files
Diffstat (limited to 'scilab_doc')
-rw-r--r--scilab_doc/neldermead/fminsearch-so.pdfbin250095 -> 253011 bytes
-rw-r--r--scilab_doc/neldermead/fminsearch-so.tex3
-rw-r--r--scilab_doc/neldermead/fminsearch/fminsearch.tex (renamed from scilab_doc/neldermead/fminsearch.tex)25
-rw-r--r--scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfunccountScilab.png (renamed from scilab_doc/neldermead/testFminsearchOptimplotfunccountScilab.png)bin5164 -> 5164 bytes
-rw-r--r--scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfvalMatlab.png (renamed from scilab_doc/neldermead/testFminsearchOptimplotfvalMatlab.png)bin6159 -> 6159 bytes
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-rw-r--r--scilab_doc/neldermead/fminsearch/testFminsearchOptimplotxScilab.png (renamed from scilab_doc/neldermead/testFminsearchOptimplotxScilab.png)bin4448 -> 4448 bytes
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-rw-r--r--scilab_doc/neldermead/introduction/introduction-demos.png (renamed from scilab_doc/neldermead/introduction-demos.png)bin37427 -> 37427 bytes
-rw-r--r--scilab_doc/neldermead/introduction/introduction-help-fminsearch.png (renamed from scilab_doc/neldermead/introduction-help-fminsearch.png)bin41211 -> 41211 bytes
-rw-r--r--scilab_doc/neldermead/introduction/introduction-help.png (renamed from scilab_doc/neldermead/introduction-help.png)bin62814 -> 62814 bytes
-rw-r--r--scilab_doc/neldermead/introduction/introduction.tex (renamed from scilab_doc/neldermead/introduction.tex)15
-rw-r--r--scilab_doc/neldermead/neldermead-introduction-so.pdfbin286698 -> 298558 bytes
-rw-r--r--scilab_doc/neldermead/neldermead-introduction-so.tex5
-rw-r--r--scilab_doc/neldermead/neldermead-neldermead-so.blg5
-rw-r--r--scilab_doc/neldermead/neldermead-neldermead-so.pdfbin591781 -> 592350 bytes
-rw-r--r--scilab_doc/neldermead/neldermead-neldermead-so.tex3
-rw-r--r--scilab_doc/neldermead/neldermead-neldermead-so.toc21
-rw-r--r--scilab_doc/neldermead/neldermead-simplex-so.pdfbin295792 -> 296556 bytes
-rw-r--r--scilab_doc/neldermead/neldermead-simplex-so.tex3
-rw-r--r--scilab_doc/neldermead/neldermead-spendley-so.pdfbin301107 -> 306298 bytes
-rw-r--r--scilab_doc/neldermead/neldermead-spendley-so.tex3
-rw-r--r--scilab_doc/neldermead/neldermead.pdf19349
-rw-r--r--scilab_doc/neldermead/neldermead.tex11
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/han1-history-simplex.png (renamed from scilab_doc/neldermead/han1-history-simplex.png)bin7826 -> 7826 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/han2-history-simplex.png (renamed from scilab_doc/neldermead/han2-history-simplex.png)bin9992 -> 9992 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/mcKinnon-insidecontraction.pdf (renamed from scilab_doc/neldermead/mcKinnon-insidecontraction.pdf)bin17159 -> 17159 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/mcKinnon-insidecontraction.svg (renamed from scilab_doc/neldermead/mcKinnon-insidecontraction.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/mckinnon-history-simplex.png (renamed from scilab_doc/neldermead/mckinnon-history-simplex.png)bin6524 -> 6524 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/method-neldermead.tex (renamed from scilab_doc/neldermead/method-neldermead.tex)41
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-contract-inside.pdf (renamed from scilab_doc/neldermead/nelder-mead-contract-inside.pdf)bin16398 -> 16398 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-contract-inside.svg (renamed from scilab_doc/neldermead/nelder-mead-contract-inside.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-contract-outside.pdf (renamed from scilab_doc/neldermead/nelder-mead-contract-outside.pdf)bin16823 -> 16823 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-contract-outside.svg (renamed from scilab_doc/neldermead/nelder-mead-contract-outside.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-extension.pdf (renamed from scilab_doc/neldermead/nelder-mead-extension.pdf)bin15560 -> 15560 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-extension.png (renamed from scilab_doc/neldermead/nelder-mead-extension.png)bin35182 -> 35182 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-extension.svg (renamed from scilab_doc/neldermead/nelder-mead-extension.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-reflection.pdf (renamed from scilab_doc/neldermead/nelder-mead-reflection.pdf)bin15565 -> 15565 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-reflection.svg (renamed from scilab_doc/neldermead/nelder-mead-reflection.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-shrink-afterci.pdf (renamed from scilab_doc/neldermead/nelder-mead-shrink-afterci.pdf)bin17146 -> 17146 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-shrink-afterci.svg (renamed from scilab_doc/neldermead/nelder-mead-shrink-afterci.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-shrink-afterco.pdf (renamed from scilab_doc/neldermead/nelder-mead-shrink-afterco.pdf)bin18075 -> 18075 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-shrink-afterco.svg (renamed from scilab_doc/neldermead/nelder-mead-shrink-afterco.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-steps.pdf (renamed from scilab_doc/neldermead/nelder-mead-steps.pdf)bin17343 -> 17343 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/nelder-mead-steps.svg (renamed from scilab_doc/neldermead/nelder-mead-steps.svg)0
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/neldermead-dimension-nfevals.png (renamed from scilab_doc/neldermead/neldermead-dimension-nfevals.png)bin4581 -> 4581 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/neldermead-dimension-rho.png (renamed from scilab_doc/neldermead/neldermead-dimension-rho.png)bin4328 -> 4328 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/neldermead-roots-variable.png (renamed from scilab_doc/neldermead/neldermead-roots-variable.png)bin4265 -> 4265 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/neldermead-roots.png (renamed from scilab_doc/neldermead/neldermead-roots.png)bin4977 -> 4977 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/quad2bis-nm-history-logfopt.png (renamed from scilab_doc/neldermead/quad2bis-nm-history-logfopt.png)bin3672 -> 3672 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/quad2bis-nm-history-sigma.png (renamed from scilab_doc/neldermead/quad2bis-nm-history-sigma.png)bin3714 -> 3714 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/quad2bis-nm-simplexcontours.png (renamed from scilab_doc/neldermead/quad2bis-nm-simplexcontours.png)bin7334 -> 7334 bytes
-rw-r--r--scilab_doc/neldermead/neldermeadmethod/torczon_test1_angle.png (renamed from scilab_doc/neldermead/torczon_test1_angle.png)bin8333 -> 8333 bytes
-rw-r--r--scilab_doc/neldermead/rosenbrock.fixed.history.fbar.txt351
-rw-r--r--scilab_doc/neldermead/rosenbrock.fixed.history.fopt.txt351
-rw-r--r--scilab_doc/neldermead/rosenbrock.fixed.history.sigma.txt351
-rw-r--r--scilab_doc/neldermead/rosenbrock.fixed.history.simplex.txt3094
-rw-r--r--scilab_doc/neldermead/scripts/compute.roots.sce (renamed from scilab_doc/neldermead/compute.roots.sce)0
-rw-r--r--scilab_doc/neldermead/simplextheory/section-simplex.tex (renamed from scilab_doc/neldermead/section-simplex.tex)10
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_axes.png (renamed from scilab_doc/neldermead/simplex_axes.png)bin3823 -> 3823 bytes
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_flat.pdf (renamed from scilab_doc/neldermead/simplex_flat.pdf)bin15245 -> 15245 bytes
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_flat.svg (renamed from scilab_doc/neldermead/simplex_flat.svg)0
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_initialfixed.pdf (renamed from scilab_doc/neldermead/simplex_initialfixed.pdf)bin8287 -> 8287 bytes
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_initialfixed.svg (renamed from scilab_doc/neldermead/simplex_initialfixed.svg)0
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_regular.png (renamed from scilab_doc/neldermead/simplex_regular.png)bin4214 -> 4214 bytes
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_towardflat.pdf (renamed from scilab_doc/neldermead/simplex_towardflat.pdf)bin16139 -> 16139 bytes
-rw-r--r--scilab_doc/neldermead/simplextheory/simplex_towardflat.svg (renamed from scilab_doc/neldermead/simplex_towardflat.svg)0
-rw-r--r--scilab_doc/neldermead/spendleymethod/method-spendley.aux92
-rw-r--r--scilab_doc/neldermead/spendleymethod/method-spendley.tex (renamed from scilab_doc/neldermead/method-spendley.tex)18
-rw-r--r--scilab_doc/neldermead/spendleymethod/quad2-spendley-simplexcontours.png (renamed from scilab_doc/neldermead/quad2-spendley-simplexcontours.png)bin5497 -> 5497 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/quad2bis-spendley-history-logfopt.png (renamed from scilab_doc/neldermead/quad2bis-spendley-history-logfopt.png)bin3792 -> 3792 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/quad2bis-spendley-history-sigma.png (renamed from scilab_doc/neldermead/quad2bis-spendley-history-sigma.png)bin4237 -> 4237 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/quad2bis-spendley-simplexcontours.png (renamed from scilab_doc/neldermead/quad2bis-spendley-simplexcontours.png)bin7315 -> 7315 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/spendley-dimension-nfevals.png (renamed from scilab_doc/neldermead/spendley-dimension-nfevals.png)bin4496 -> 4496 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/spendley-dimension-rho.png (renamed from scilab_doc/neldermead/spendley-dimension-rho.png)bin12711 -> 12711 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/spendley-steps-reflect.pdf (renamed from scilab_doc/neldermead/spendley-steps-reflect.pdf)bin13762 -> 13762 bytes
-rw-r--r--scilab_doc/neldermead/spendleymethod/spendley-steps-reflect.svg (renamed from scilab_doc/neldermead/spendley-steps-reflect.svg)0
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-rw-r--r--scilab_doc/neldermead/validation.tex11
86 files changed, 10579 insertions, 13183 deletions
diff --git a/scilab_doc/neldermead/fminsearch-so.pdf b/scilab_doc/neldermead/fminsearch-so.pdf
index 9b0df46..f966125 100644
--- a/scilab_doc/neldermead/fminsearch-so.pdf
+++ b/scilab_doc/neldermead/fminsearch-so.pdf
Binary files differ
diff --git a/scilab_doc/neldermead/fminsearch-so.tex b/scilab_doc/neldermead/fminsearch-so.tex
index e364aa9..708c090 100644
--- a/scilab_doc/neldermead/fminsearch-so.tex
+++ b/scilab_doc/neldermead/fminsearch-so.tex
@@ -69,7 +69,7 @@ September 2009
69 69
70\tableofcontents 70\tableofcontents
71 71
72\include{fminsearch} 72\include{fminsearch/fminsearch}
73 73
74\clearpage 74\clearpage
75 75
@@ -80,6 +80,7 @@ September 2009
80\bibliography{neldermead} 80\bibliography{neldermead}
81 81
82% Index 82% Index
83\addcontentsline{toc}{chapter}{Index}
83\printindex 84\printindex
84 85
85\end{document} 86\end{document}
diff --git a/scilab_doc/neldermead/fminsearch.tex b/scilab_doc/neldermead/fminsearch/fminsearch.tex
index c5960f2..c0d954a 100644
--- a/scilab_doc/neldermead/fminsearch.tex
+++ b/scilab_doc/neldermead/fminsearch/fminsearch.tex
@@ -1,4 +1,5 @@
1\chapter{The \scifunction{fminsearch} function} 1\chapter{The \scifunction{fminsearch} function}
2\index{fminsearch}
2 3
3In this chapter, we analyze the implementation of the \scifunction{fminsearch} 4In this chapter, we analyze the implementation of the \scifunction{fminsearch}
4which is provided in Scilab. In the first part, we describe the specific 5which is provided in Scilab. In the first part, we describe the specific
@@ -23,6 +24,7 @@ accepted only if it improves over the reflection point.
23 24
24\subsection{The initial simplex} 25\subsection{The initial simplex}
25\index{Pfeffer, L.} 26\index{Pfeffer, L.}
27\index{Fan, Ellen}
26 28
27The fminsearch algorithm uses a special initial simplex, which is an 29The fminsearch algorithm uses a special initial simplex, which is an
28heuristic depending on the initial guess. The strategy chosen by 30heuristic depending on the initial guess. The strategy chosen by
@@ -327,6 +329,8 @@ that is, produces the same intermediate steps.
327The following Matlab script allows to get deeper information by printing a message at each iteration 329The following Matlab script allows to get deeper information by printing a message at each iteration
328with the "Display" option. 330with the "Display" option.
329 331
332\index{optimset}
333
330\lstset{language=matlabscript} 334\lstset{language=matlabscript}
331\begin{lstlisting} 335\begin{lstlisting}
332% Matlab 336% Matlab
@@ -434,6 +438,7 @@ Optimization terminated:
434 438
435The following Scilab script set the "Display" option to "iter" and 439The following Scilab script set the "Display" option to "iter" and
436run the \scifunction{fminsearch} function. 440run the \scifunction{fminsearch} function.
441\index{optimset}
437 442
438\lstset{language=scilabscript} 443\lstset{language=scilabscript}
439\begin{lstlisting} 444\begin{lstlisting}
@@ -577,6 +582,7 @@ drawnow
577 582
578The following Matlab script allows to perform the optimization 583The following Matlab script allows to perform the optimization
579so that the output function is called back at each iteration. 584so that the output function is called back at each iteration.
585\index{optimset}
580 586
581\lstset{language=matlabscript} 587\lstset{language=matlabscript}
582\begin{lstlisting} 588\begin{lstlisting}
@@ -589,7 +595,7 @@ This produces the plot which is presented in figure \ref{fig-fminsearch-matlab-o
589 595
590\begin{figure} 596\begin{figure}
591\begin{center} 597\begin{center}
592\includegraphics[width=10cm]{testFminsearchPlotMatlab.png} 598\includegraphics[width=10cm]{fminsearch/testFminsearchPlotMatlab.png}
593\end{center} 599\end{center}
594\caption{Plot produced by Matlab's fminsearch, with customized output function.} 600\caption{Plot produced by Matlab's fminsearch, with customized output function.}
595\label{fig-fminsearch-matlab-outputfun} 601\label{fig-fminsearch-matlab-outputfun}
@@ -620,6 +626,7 @@ Matlab also prints the following messages in the console.
620 626
621The following Scilab script sets the "OutputFcn" option and then calls 627The following Scilab script sets the "OutputFcn" option and then calls
622the \scifunction{fminsearch} in order to perform the optimization. 628the \scifunction{fminsearch} in order to perform the optimization.
629\index{optimset}
623 630
624\lstset{language=scilabscript} 631\lstset{language=scilabscript}
625\begin{lstlisting} 632\begin{lstlisting}
@@ -641,7 +648,7 @@ in figure \ref{fig-fminsearch-scilab-outputfun}.
641 648
642\begin{figure} 649\begin{figure}
643\begin{center} 650\begin{center}
644\includegraphics[width=10cm]{testFminsearchPlotScilab.png} 651\includegraphics[width=10cm]{fminsearch/testFminsearchPlotScilab.png}
645\end{center} 652\end{center}
646\caption{Plot produced by Scilab's fminsearch, with customized output function.} 653\caption{Plot produced by Scilab's fminsearch, with customized output function.}
647\label{fig-fminsearch-scilab-outputfun} 654\label{fig-fminsearch-scilab-outputfun}
@@ -682,6 +689,10 @@ displays the type of the last performed step.
682 689
683\subsection{Predefined plot functions} 690\subsection{Predefined plot functions}
684 691
692\index{optimplotfval}
693\index{optimplotx}
694\index{optimplotfunccount}
695
685Several pre-defined plot functions are provided with 696Several pre-defined plot functions are provided with
686the \scifunction{fminsearch} function. 697the \scifunction{fminsearch} function.
687These functions are 698These functions are
@@ -693,6 +704,7 @@ These functions are
693 704
694In the following Matlab script, we use the \scifunction{optimplotfval} 705In the following Matlab script, we use the \scifunction{optimplotfval}
695pre-defined function. 706pre-defined function.
707\index{optimset}
696 708
697\lstset{language=matlabscript} 709\lstset{language=matlabscript}
698\begin{lstlisting} 710\begin{lstlisting}
@@ -706,7 +718,7 @@ The previous script produces the plot which is presented in figure
706 718
707\begin{figure} 719\begin{figure}
708\begin{center} 720\begin{center}
709\includegraphics[width=10cm]{testFminsearchOptimplotfvalMatlab.png} 721\includegraphics[width=10cm]{fminsearch/testFminsearchOptimplotfvalMatlab.png}
710\end{center} 722\end{center}
711\caption{Plot produced by Matlab's fminsearch, with the \scifunction{optimplotfval} function.} 723\caption{Plot produced by Matlab's fminsearch, with the \scifunction{optimplotfval} function.}
712\label{fig-fminsearch-matlab-optimplotfval} 724\label{fig-fminsearch-matlab-optimplotfval}
@@ -714,6 +726,7 @@ The previous script produces the plot which is presented in figure
714 726
715The following Scilab script uses the \scifunction{optimplotfval} 727The following Scilab script uses the \scifunction{optimplotfval}
716pre-defined function. 728pre-defined function.
729\index{optimset}
717 730
718\lstset{language=scilabscript} 731\lstset{language=scilabscript}
719\begin{lstlisting} 732\begin{lstlisting}
@@ -727,7 +740,7 @@ The previous script produces the plot which is presented in figure
727 740
728\begin{figure} 741\begin{figure}
729\begin{center} 742\begin{center}
730\includegraphics[width=10cm]{testFminsearchOptimplotfvalScilab.png} 743\includegraphics[width=10cm]{fminsearch/testFminsearchOptimplotfvalScilab.png}
731\end{center} 744\end{center}
732\caption{Plot produced by Scilab's fminsearch, with the \scifunction{optimplotfval} function.} 745\caption{Plot produced by Scilab's fminsearch, with the \scifunction{optimplotfval} function.}
733\label{fig-fminsearch-scilab-optimplotfval} 746\label{fig-fminsearch-scilab-optimplotfval}
@@ -744,7 +757,7 @@ functions.
744 757
745\begin{figure} 758\begin{figure}
746\begin{center} 759\begin{center}
747\includegraphics[width=10cm]{testFminsearchOptimplotxScilab.png} 760\includegraphics[width=10cm]{fminsearch/testFminsearchOptimplotxScilab.png}
748\end{center} 761\end{center}
749\caption{Plot produced by Scilab's fminsearch, with the \scifunction{optimplotx} function.} 762\caption{Plot produced by Scilab's fminsearch, with the \scifunction{optimplotx} function.}
750\label{fig-fminsearch-scilab-optimplotx} 763\label{fig-fminsearch-scilab-optimplotx}
@@ -752,7 +765,7 @@ functions.
752 765
753\begin{figure} 766\begin{figure}
754\begin{center} 767\begin{center}
755\includegraphics[width=10cm]{testFminsearchOptimplotfunccountScilab.png} 768\includegraphics[width=10cm]{fminsearch/testFminsearchOptimplotfunccountScilab.png}
756\end{center} 769\end{center}
757\caption{Plot produced by Scilab's fminsearch, with the \scifunction{optimplotfunccount} function.} 770\caption{Plot produced by Scilab's fminsearch, with the \scifunction{optimplotfunccount} function.}
758\label{fig-fminsearch-scilab-optimplotfunccount} 771\label{fig-fminsearch-scilab-optimplotfunccount}
diff --git a/scilab_doc/neldermead/testFminsearchOptimplotfunccountScilab.png b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfunccountScilab.png
index 28ca428..28ca428 100644
--- a/scilab_doc/neldermead/testFminsearchOptimplotfunccountScilab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfunccountScilab.png
Binary files differ
diff --git a/scilab_doc/neldermead/testFminsearchOptimplotfvalMatlab.png b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfvalMatlab.png
index 8e50630..8e50630 100644
--- a/scilab_doc/neldermead/testFminsearchOptimplotfvalMatlab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfvalMatlab.png
Binary files differ
diff --git a/scilab_doc/neldermead/testFminsearchOptimplotfvalScilab.png b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfvalScilab.png
index 8651bdb..8651bdb 100644
--- a/scilab_doc/neldermead/testFminsearchOptimplotfvalScilab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotfvalScilab.png
Binary files differ
diff --git a/scilab_doc/neldermead/testFminsearchOptimplotxMatlab.png b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotxMatlab.png
index 9ef102a..9ef102a 100644
--- a/scilab_doc/neldermead/testFminsearchOptimplotxMatlab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotxMatlab.png
Binary files differ
diff --git a/scilab_doc/neldermead/testFminsearchOptimplotxScilab.png b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotxScilab.png
index 7697c0e..7697c0e 100644
--- a/scilab_doc/neldermead/testFminsearchOptimplotxScilab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchOptimplotxScilab.png
Binary files differ
diff --git a/scilab_doc/neldermead/testFminsearchPlotMatlab.png b/scilab_doc/neldermead/fminsearch/testFminsearchPlotMatlab.png
index 09e3476..09e3476 100644
--- a/scilab_doc/neldermead/testFminsearchPlotMatlab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchPlotMatlab.png
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diff --git a/scilab_doc/neldermead/testFminsearchPlotScilab.png b/scilab_doc/neldermead/fminsearch/testFminsearchPlotScilab.png
index 5408533..5408533 100644
--- a/scilab_doc/neldermead/testFminsearchPlotScilab.png
+++ b/scilab_doc/neldermead/fminsearch/testFminsearchPlotScilab.png
Binary files differ
diff --git a/scilab_doc/neldermead/introduction-demos.png b/scilab_doc/neldermead/introduction/introduction-demos.png
index 2cd8327..2cd8327 100644
--- a/scilab_doc/neldermead/introduction-demos.png
+++ b/scilab_doc/neldermead/introduction/introduction-demos.png
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diff --git a/scilab_doc/neldermead/introduction-help-fminsearch.png b/scilab_doc/neldermead/introduction/introduction-help-fminsearch.png
index 58fe455..58fe455 100644
--- a/scilab_doc/neldermead/introduction-help-fminsearch.png
+++ b/scilab_doc/neldermead/introduction/introduction-help-fminsearch.png
Binary files differ
diff --git a/scilab_doc/neldermead/introduction-help.png b/scilab_doc/neldermead/introduction/introduction-help.png
index 2740b7b..2740b7b 100644
--- a/scilab_doc/neldermead/introduction-help.png
+++ b/scilab_doc/neldermead/introduction/introduction-help.png
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diff --git a/scilab_doc/neldermead/introduction.tex b/scilab_doc/neldermead/introduction/introduction.tex
index 35677c0..d8d2647 100644
--- a/scilab_doc/neldermead/introduction.tex
+++ b/scilab_doc/neldermead/introduction/introduction.tex
@@ -7,6 +7,8 @@ show how to use the component with a simple example.
7\section{Overview} 7\section{Overview}
8\index{Torczon, Virginia} 8\index{Torczon, Virginia}
9\index{Wright, Margaret} 9\index{Wright, Margaret}
10\index{Nelder, John}
11\index{Mead, Roger}
10 12
11The Nelder-Mead simplex algorithm \cite{citeulike:3009487}, published in 1965, is an enormously 13The Nelder-Mead simplex algorithm \cite{citeulike:3009487}, published in 1965, is an enormously
12popular search method for multidimensional unconstrained optimization. 14popular search method for multidimensional unconstrained optimization.
@@ -31,6 +33,11 @@ function values. The algorithm attemps to replace the worst vertex with
31a new point, which depends on the worst point and the centre of the best 33a new point, which depends on the worst point and the centre of the best
32vertices. 34vertices.
33 35
36\index{Spendley, W.}
37\index{Hext, G. R.}
38\index{Himsworth, F. R.}
39\index{Box, M. J.}
40
34The goal of this toolbox is to provide a Nelder-Mead (1965) direct search optimization method to solve the 41The goal of this toolbox is to provide a Nelder-Mead (1965) direct search optimization method to solve the
35following unconstrained optimization problem 42following unconstrained optimization problem
36\begin{eqnarray} 43\begin{eqnarray}
@@ -39,7 +46,7 @@ following unconstrained optimization problem
39where $\bx\in \RR^n$, $n$ is the number of optimization parameters and $f$ is the objective 46where $\bx\in \RR^n$, $n$ is the number of optimization parameters and $f$ is the objective
40function $f:\RR^n\rightarrow \RR$. 47function $f:\RR^n\rightarrow \RR$.
41In order to solve the unconstrained optimization problem, the Nelder-Mead 48In order to solve the unconstrained optimization problem, the Nelder-Mead
42algorithm uses a variable shape simplex. The toolbox also provide Spendley's et al. 49algorithm uses a variable shape simplex. The toolbox also provide Spendley, Hext and Himsworth's
43algorithm \cite{Spendley1962} (1962), which uses a fixed shape simplex. Historically, the algorithm created 50algorithm \cite{Spendley1962} (1962), which uses a fixed shape simplex. Historically, the algorithm created
44by Nelder and Mead was designed as an improvement on Spendley's et al. algorithm. 51by Nelder and Mead was designed as an improvement on Spendley's et al. algorithm.
45The Box complex algorithm \cite{Box1965} (1965), which is an extension of Spendley's et al. algorithm, solves the 52The Box complex algorithm \cite{Box1965} (1965), which is an extension of Spendley's et al. algorithm, solves the
@@ -281,7 +288,7 @@ corresponding functions, as well as many sample uses.
281 288
282\begin{figure} 289\begin{figure}
283\begin{center} 290\begin{center}
284\includegraphics[width=15cm]{introduction-help.png} 291\includegraphics[width=15cm]{introduction/introduction-help.png}
285\end{center} 292\end{center}
286\caption{Built-in help for the Nelder-Mead component} 293\caption{Built-in help for the Nelder-Mead component}
287\label{fig-intro-help} 294\label{fig-intro-help}
@@ -289,7 +296,7 @@ corresponding functions, as well as many sample uses.
289 296
290\begin{figure} 297\begin{figure}
291\begin{center} 298\begin{center}
292\includegraphics[width=15cm]{introduction-help-fminsearch.png} 299\includegraphics[width=15cm]{introduction/introduction-help-fminsearch.png}
293\end{center} 300\end{center}
294\caption{Built-in help for the \scifunction{fminsearch} function} 301\caption{Built-in help for the \scifunction{fminsearch} function}
295\label{fig-intro-helpfminsearch} 302\label{fig-intro-helpfminsearch}
@@ -301,7 +308,7 @@ and are presented in figure \ref{fig-intro-demos}.
301 308
302\begin{figure} 309\begin{figure}
303\begin{center} 310\begin{center}
304\includegraphics[width=10cm]{introduction-demos.png} 311\includegraphics[width=10cm]{introduction/introduction-demos.png}
305\end{center} 312\end{center}
306\caption{Built-in demonstration scripts for the Nelder-Mead component} 313\caption{Built-in demonstration scripts for the Nelder-Mead component}
307\label{fig-intro-demos} 314\label{fig-intro-demos}
diff --git a/scilab_doc/neldermead/neldermead-introduction-so.pdf b/scilab_doc/neldermead/neldermead-introduction-so.pdf
index 16beed5..0e381d9 100644
--- a/scilab_doc/neldermead/neldermead-introduction-so.pdf
+++ b/scilab_doc/neldermead/neldermead-introduction-so.pdf
Binary files differ
diff --git a/scilab_doc/neldermead/neldermead-introduction-so.tex b/scilab_doc/neldermead/neldermead-introduction-so.tex
index 6a05c35..e52c572 100644
--- a/scilab_doc/neldermead/neldermead-introduction-so.tex
+++ b/scilab_doc/neldermead/neldermead-introduction-so.tex
@@ -70,7 +70,7 @@ Micha\"el BAUDIN
70 70
71\renewcommand{\baselinestretch}{1.18}\small \normalsize 71\renewcommand{\baselinestretch}{1.18}\small \normalsize
72 72
73\include{introduction} 73\include{introduction/introduction}
74 74
75\clearpage 75\clearpage
76 76
@@ -81,5 +81,8 @@ Micha\"el BAUDIN
81\bibliographystyle{plain} 81\bibliographystyle{plain}
82\bibliography{neldermead} 82\bibliography{neldermead}
83 83
84\addcontentsline{toc}{chapter}{Index}
85\printindex
86
84\end{document} 87\end{document}
85 88
diff --git a/scilab_doc/neldermead/neldermead-neldermead-so.blg b/scilab_doc/neldermead/neldermead-neldermead-so.blg
deleted file mode 100644
index 57c6cd3..0000000
--- a/scilab_doc/neldermead/neldermead-neldermead-so.blg
+++ /dev/null
@@ -1,5 +0,0 @@
1This is BibTeX, Version 0.99cThe top-level auxiliary file: neldermead-neldermead-so.aux
2A level-1 auxiliary file: chapter-notations.aux
3A level-1 auxiliary file: method-neldermead.aux
4The style file: plain.bst
5Database file #1: neldermead.bib
diff --git a/scilab_doc/neldermead/neldermead-neldermead-so.pdf b/scilab_doc/neldermead/neldermead-neldermead-so.pdf
index b41a233..b22c0b6 100644
--- a/scilab_doc/neldermead/neldermead-neldermead-so.pdf
+++ b/scilab_doc/neldermead/neldermead-neldermead-so.pdf
Binary files differ
diff --git a/scilab_doc/neldermead/neldermead-neldermead-so.tex b/scilab_doc/neldermead/neldermead-neldermead-so.tex
index a18a319..64b0fc0 100644
--- a/scilab_doc/neldermead/neldermead-neldermead-so.tex
+++ b/scilab_doc/neldermead/neldermead-neldermead-so.tex
@@ -80,7 +80,7 @@ September 2009
80\renewcommand{\baselinestretch}{1.18}\small \normalsize 80\renewcommand{\baselinestretch}{1.18}\small \normalsize
81 81
82\include{chapter-notations} 82\include{chapter-notations}
83\include{method-neldermead} 83\include{neldermeadmethod/method-neldermead}
84 84
85\clearpage 85\clearpage
86 86
@@ -92,6 +92,7 @@ September 2009
92\bibliography{neldermead} 92\bibliography{neldermead}
93 93
94% Index 94% Index
95\addcontentsline{toc}{chapter}{Index}
95\printindex 96\printindex
96 97
97\end{document} 98\end{document}
diff --git a/scilab_doc/neldermead/neldermead-neldermead-so.toc b/scilab_doc/neldermead/neldermead-neldermead-so.toc
deleted file mode 100644
index 493f697..0000000
--- a/scilab_doc/neldermead/neldermead-neldermead-so.toc
+++ /dev/null
@@ -1,21 +0,0 @@
1\contentsline {chapter}{\numberline {1}Nelder-Mead method}{4}{chapter.1}
2\contentsline {section}{\numberline {1.1}Introduction}{4}{section.1.1}
3\contentsline {subsection}{\numberline {1.1.1}Overview}{4}{subsection.1.1.1}
4\contentsline {subsection}{\numberline {1.1.2}Algorithm}{5}{subsection.1.1.2}
5\contentsline {section}{\numberline {1.2}Geometric analysis}{9}{section.1.2}
6\contentsline {section}{\numberline {1.3}Convergence properties on a quadratic}{9}{section.1.3}
7\contentsline {subsection}{\numberline {1.3.1}With default parameters}{13}{subsection.1.3.1}
8\contentsline {subsection}{\numberline {1.3.2}With variable parameters}{17}{subsection.1.3.2}
9\contentsline {section}{\numberline {1.4}Numerical experiments}{20}{section.1.4}
10\contentsline {subsection}{\numberline {1.4.1}Quadratic function}{21}{subsection.1.4.1}
11\contentsline {subsubsection}{Badly scaled quadratic function}{22}{section*.3}
12\contentsline {subsection}{\numberline {1.4.2}Sensitivity to dimension}{24}{subsection.1.4.2}
13\contentsline {subsection}{\numberline {1.4.3}O'Neill test cases}{27}{subsection.1.4.3}
14\contentsline {subsection}{\numberline {1.4.4}Convergence to a non stationnary point}{32}{subsection.1.4.4}
15\contentsline {subsection}{\numberline {1.4.5}Han counter examples}{36}{subsection.1.4.5}
16\contentsline {subsubsection}{First counter example}{36}{section*.4}
17\contentsline {subsubsection}{Second counter example}{36}{section*.5}
18\contentsline {subsection}{\numberline {1.4.6}Torczon's numerical experiments}{37}{subsection.1.4.6}
19\contentsline {subsubsection}{Penalty \#1}{38}{section*.6}
20\contentsline {section}{\numberline {1.5}Conclusion}{40}{section.1.5}
21\contentsline {chapter}{Bibliography}{41}{section.1.5}
diff --git a/scilab_doc/neldermead/neldermead-simplex-so.pdf b/scilab_doc/neldermead/neldermead-simplex-so.pdf
index 607a426..fa13c27 100644
--- a/scilab_doc/neldermead/neldermead-simplex-so.pdf
+++ b/scilab_doc/neldermead/neldermead-simplex-so.pdf
Binary files differ
diff --git a/scilab_doc/neldermead/neldermead-simplex-so.tex b/scilab_doc/neldermead/neldermead-simplex-so.tex
index 8251de3..78cb2f4 100644
--- a/scilab_doc/neldermead/neldermead-simplex-so.tex
+++ b/scilab_doc/neldermead/neldermead-simplex-so.tex
@@ -72,7 +72,7 @@ Micha\"el BAUDIN
72 72
73 73
74\include{chapter-notations} 74\include{chapter-notations}
75\include{section-simplex} 75\include{simplextheory/section-simplex}
76 76
77 77
78\clearpage 78\clearpage
@@ -87,6 +87,7 @@ Micha\"el BAUDIN
87\bibliography{neldermead} 87\bibliography{neldermead}
88 88
89% Index 89% Index
90\addcontentsline{toc}{chapter}{Index}
90\printindex 91\printindex
91 92
92\end{document} 93\end{document}
diff --git a/scilab_doc/neldermead/neldermead-spendley-so.pdf b/scilab_doc/neldermead/neldermead-spendley-so.pdf
index 01e42c8..7bb1f5b 100644
--- a/scilab_doc/neldermead/neldermead-spendley-so.pdf
+++ b/scilab_doc/neldermead/neldermead-spendley-so.pdf
Binary files differ
diff --git a/scilab_doc/neldermead/neldermead-spendley-so.tex b/scilab_doc/neldermead/neldermead-spendley-so.tex
index a0c8fa7..3b9bcd0 100644
--- a/scilab_doc/neldermead/neldermead-spendley-so.tex
+++ b/scilab_doc/neldermead/neldermead-spendley-so.tex
@@ -71,7 +71,7 @@ Micha\"el BAUDIN
71\renewcommand{\baselinestretch}{1.18}\small \normalsize 71\renewcommand{\baselinestretch}{1.18}\small \normalsize
72 72
73\include{chapter-notations} 73\include{chapter-notations}
74\include{method-spendley} 74\include{spendleymethod/method-spendley}
75 75
76\clearpage 76\clearpage
77 77
@@ -83,6 +83,7 @@ Micha\"el BAUDIN
83\bibliography{neldermead} 83\bibliography{neldermead}
84 84
85% Index 85% Index
86\addcontentsline{toc}{chapter}{Index}
86\printindex 87\printindex
87 88
88\end{document} 89\end{document}
diff --git a/scilab_doc/neldermead/neldermead.pdf b/scilab_doc/neldermead/neldermead.pdf
index f2b075a..1af1c93 100644
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